BioFor theme - Dynamics of Plant Biodiversity in Rainforests

Description

Background

The Tropical Rainforest (TRF) is considered the richest and most complex ecosystem on the planet, hosting more than 50% of today's living species on about 7% of the world's land. These characteristics and its accelerated disappearance as a result of global, climatic and socio-economic changes caused by human activity, put it at the forefront of international environmental concerns regarding biodiversity conservation, sustainable management of natural resources, regulation of global biogeochemical cycles and carbon storage. At the same time, the relative lack of knowledge of its functioning makes it a priority issue for fundamental ecological research, which seeks to identify and quantify the natural processes that maintain a high level of diversity in these ecosystems, a prerequisite for predicting their evolution under different global change scenarios.

Objectives

The main objective is to try to understand the organization and dynamics of the diversity of TRF tree stands at the regional level. Three main types of process are generally considered to contribute to the maintenance of diversity at this scale: local interactions, environmental filtering and dispersion. To which are added the turnover of vegetation and its forcing. In concrete terms, the relative importance of these processes must be inferred from observation and using modelling in order to provide managers with the knowledge they need to best decide on their actions in biodiversity management and conservation.

Expected Results

  •  Cognitive and theoretical advances on the biodiversity dynamics of TRFs;
  •  Methodological advances for the study of spatial-temporal processes in TRFs;
  •  Contribution to the capitalisation of information on TRFs within the framework of major regional forest observatories (DynAfFor and AfriTRON in Central Africa, RAINFOR, Guyafor, Amazon Tree Diversity Network, NC-PIPPN in New Caledonia, etc.);
  •  Applied outcomes in terms of mapping forest types, susceptibility to climate and anthropogenic changes and recommendations for the conservation of TRFs.

Significant events

  •  Organization of a symposium "Towards a unified vision of the central African forests" (S. Gourlet-Fleury, A. Fayolle. & R. Pélissier) during the 53rd annual conference of the ATBC (Association for Tropical Biology and Conservation), Montpelllier, 2016.

Main funded projects

Acronym Title Duration
RELIQUESFragmentation des forets sur substrats ultramafiques en Nouvelle Calédonie2019 - 2022
SAOTHREATFLORACharacterization of the Threatened Flora of São Tomé and Príncipe2019 - 2021
DEEPROOTInto the deep: exploring root distribution and function in tropical forests.2019 - 2020
TALL TREESA 3D perspective on the effects of topography and wind on forest height and dynamics2019 - 2023
CARTODIV-DENDROLIDARReconnaissance spécifique et cartographie des arbres de la canopée en forêt tropicale ET télédétection individu centrée pour l'évaluation de la ressource en bois d'œuvre en Guyane française2017 - 2020
USBIOUncertainty in Scenarios of BIOdiversity2017 - 2019
CURCOLEC-ACCuration, gestion et développement des collections écologiques liées au réseau de parcelles permanentes d'Afrique centrale2017 - 2019
LEAF EXPVALLeaf ExpVal2017 - 2018
COGEFORConnaissances et outils et pour la gestion conservatoire des forêts naturelles en Province Nord2016 - 2019
LONGTIMELong Term Impact of ancient Amerindian settlements on Guianese forests2016 - 2019
METISTModelling tropical diversity and forest functioning in space and time2016 - 2019
AFRODYNCentral AFrican Rain fOrests: past DYNamics and future resilience2015 - 2017
DYNFORDIVForçages environnementaux et anthropiques du turnover forestier2014 - 2018
RAINBIOAfrican RAIN forest community dynamics: implications for tropical BIOdiversity conservation and climate change mitigation2014 - 2016
COFORTIPSCongo basin forests: tipping points for biodiversity conservation and resilience of forested social and ecological systems.2013 - 2015

Theses defended

  •  Guitet, S., 2015. Diversité des écosystèmes forestiers de Guyane française : distribution, déterminants et conséquences en termes de services écosystémiques. PhD thesis, ED SIBAGHE, Univ. Montpellier, 350 p. (Co-dir: P. Couteron & D. Sabatier; INRA-ONF interface position). Current position: permanent position at IGN
  •  Allié, E. 2016. Assemblage des communautés d’arbres à une échelle locale en forêt tropicale - Apport d'une approche intégrative. PhD thesis, Univ. French Guiana. 214 pp. (Co-dir: C. Baraloto & R. Pélissier; Thesis grant from LabEx CEBA). Current position: scientific mediator
  •  Cherrington, E. A. 2016. Towards ecologically consistent remote sensing mapping of tree communities in French Guiana: are forest types identifiable from spatio-temporal canopy reflectance patterns?. PhD thesis, AgroParisTech, France and University of Technology Dresden, Germany. 123 pp. (Co-dir. R. Pélissier & U. Berger; Erasmus Mundus PhD program FONASO). Current position: SIG expert posted in USA for a belizian NGO
  •  Bose, R. 2017. Influence of past and present environment on the ecology and biogeography of tree species in the Western Ghats biodiversity hotspot. PhD thesis AgroParisTech, France. (Co-dir: R. Pélissier & F. Munoz; International PhD Grant from IFP). Current position: Temporary contract as post-doctoral researcher at the Congo Basin Institute (UCLA) in Cameroon
  •  Libalah, M. 2018. Rôle des facteurs environnementaux sur la structure des communautés d’arbres des forêts de basse altitude en Afrique centrale. PhD thesis, Yaoundé 1 Univ., Cameroon (Co-dir P. Couteron, V. Droissart & B. Sonké; ARTS IRD / SCAC Cameroon scholarship). Current position: Temporary contract as post-doctoral researcher at IRD Cameroon.

Theses in progress

  •  Blanchard, G. 2016-2019- Contribution des forêts de basse altitude au maintien de la biodiversité en Nouvelle-Calédonie. Univ. New Caledonia (Co-dir F. Munoz & P. Birnbaum; COGEFOR project)
  •  Huertas, C. 2018-2021 – Predicting the impact of climate change on forest dynamics and spatial organization of forest communities in the tropics. ED Gaia, Univ. Montpellier (Co-dir. G. Vincent & R. Pélissier; IRD-MOPGA co-funding)
  •  Laybros, A. 2017-2021 - Cartographie des arbres de canopée tropicale par fusion LiDAR-hyperspectral. ED Gaia, Univ. Montpellier (Dir. G. Vincent; ONF CIFRE scholarship)
  •  Zebaze, D. 2016 - 2019 - RRôle et importance de la banque de graines du sol dans la dynamique et la régénération des peuplements forestiers du Sud-est Cameroun. Univ. Yaoundé 1 (Co-dir J.-L. Doucet, B. Sonké & V. Droissart)

HDR defended

  •  Vincent, G. 2015. Tropical forest dynamics modelling, Insights and perspectives. HDR memoir, ED Gaia, Univ. Montpellier, 41 p.
  •  Birnbaum, P. 2017. Spatialisation de la diversité et de la structure : un enjeu pour la conservation des forêts tropicale.y HDR memoir, ED Gaia, Univ. Montpellier, 91 p.
Main scientific production 2019-2020
Publications HAL de la collection AMAP

2020

Journal articles

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Grégoire Blanchard, Philippe Birnbaum, François Munoz. Extinction–immigration dynamics lag behind environmental filtering in shaping the composition of tropical dry forests within a changing landscape. Ecography, Wiley, 2020, 43 (6), pp.869-881. ⟨10.1111/ecog.04870⟩. ⟨hal-02512987⟩
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https://hal.umontpellier.fr/hal-02512987/file/Birnbaum_etal_Ecography_2020.pdf BibTex
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Stéphanie Bodin, Jean-François Molino, Guillaume Odonne, Laurent Bremond. Unraveling pre-Columbian occupation patterns in the tropical forests of French Guiana using an anthracological approach. Vegetation History and Archaeobotany, Springer Verlag, 2020, 29, pp.567-580. ⟨10.1007/s00334-019-00767-w⟩. ⟨hal-02441094⟩
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Jérôme Chave, Camille Piponiot, Isabelle Maréchaux, Hubert de Foresta, Denis Larpin, et al.. Slow rate of secondary forest carbon accumulation in the Guianas compared with the rest of the Neotropics. Ecological Applications, Ecological Society of America, 2020, 30 (1), pp.e02004. ⟨10.1002/eap.2004⟩. ⟨hal-02309463⟩
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Léo-Paul Dagallier, Steven Janssens, Gilles Dauby, Anne Blach-Overgaard, Barbara Mackinder, et al.. Cradles and museums of generic plant diversity across tropical Africa. New Phytologist, Wiley, 2020, 225 (5), pp.2196-2213. ⟨10.1111/nph.16293⟩. ⟨hal-02407084⟩
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https://hal.umontpellier.fr/hal-02407084/file/Dauby_etal_New_Phytol_2019.pdf BibTex
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Boris Demenou, Jérémy Migliore, Myriam Heuertz, Franck Monthe, Dario Ojeda, et al.. Plastome phylogeography in two African rain forest legume trees reveals that Dahomey Gap populations originate from the Cameroon volcanic line. Molecular Phylogenetics and Evolution, Elsevier, 2020, 150, pp.106854. ⟨10.1016/j.ympev.2020.106854⟩. ⟨hal-02893119⟩
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Myriam Heuertz, Henri Caron, Caroline Scotti-Saintagne, Pascal Petronelli, Julien Engel, et al.. The hyperdominant tropical tree Eschweilera coriacea (Lecythidaceae) shows higher genetic heterogeneity than sympatric Eschweilera species in French Guiana. Plant Ecology and Evolution, Botanic Garden Meise and Royal Botanical Society of Belgium, 2020, 153 (1), pp.67-81. ⟨10.5091/plecevo.2020.1565⟩. ⟨hal-02536332⟩
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https://hal.umontpellier.fr/hal-02536332/file/Sabatier_etal_Plant_Ecol_Evol_2020_153_1.pdf BibTex
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John Katembo, Moses Libalah, Faustin Boyemba, Gilles Dauby, Nicolas Barbier. Multiple Stable Dominance States in the Congo Basin Forests. Forests, MDPI, 2020, 11 (5), pp.553. ⟨10.3390/f11050000⟩. ⟨hal-02586110⟩
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https://hal.umontpellier.fr/hal-02586110/file/Katembo_etal_Forests_2020_11_5.pdf BibTex
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Anthony Laybros, Mélaine Aubry-Kientz, Jean-Baptiste Feret, Caroline Bedeau, Olivier Brunaux, et al.. Quantitative Airborne Inventories in Dense Tropical Forest Using Imaging Spectroscopy. Remote Sensing, MDPI, 2020, 12 (10), pp.1577. ⟨10.3390/rs12101577⟩. ⟨hal-02618684⟩
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https://hal.archives-ouvertes.fr/hal-02618684/file/Laybros_etal_Remote_Sensing_2020_12_10.pdf BibTex
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Isabelle Maréchaux, Laurent Saint‐andré, Megan Bartlett, Lawren Sack, Jerome Chave. Leaf drought tolerance cannot be inferred from classic leaf traits in a tropical rainforest. Journal of Ecology, Wiley, 2020, 108 (3), pp.1030-1045. ⟨10.1111/1365-2745.13321⟩. ⟨hal-02394283⟩
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https://hal.umontpellier.fr/hal-02394283/file/Mar-chaux_et_al-2019-Journal_of_Ecology-1.pdf BibTex
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Anand Osuri, Siddarth Machado, Jayashree Ratnam, Mahesh Sankaran, N. Ayyappan, et al.. Tree diversity and carbon storage cobenefits in tropical human-dominated landscapes. Conservation Letters, Wiley, 2020, 13 (2), pp.e12699. ⟨10.1111/conl.12699⟩. ⟨hal-02443335⟩
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https://hal.umontpellier.fr/hal-02443335/file/Osuri_et_al-2020-Conservation_Letters.pdf BibTex
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Robin Pouteau, Santiago Trueba, Sandrine Isnard. Retracing the contours of the early angiosperm environmental niche. Annals of Botany, Oxford University Press (OUP), 2020, 125 (1), pp.49-57. ⟨10.1093/aob/mcz131⟩. ⟨hal-02277290⟩
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Kaina Privet, Vincent Vedel, Claire Fortunel, Jérôme Orivel, Quentin Martinez, et al.. Relative Efficiency of Pitfall Trapping vs. Nocturnal Hand Collecting in Assessing Soil-Dwelling Spider Diversity along A Structural Gradient of Neotropical Habitats. Diversity, MDPI, 2020, 12 (2), pp.81. ⟨10.3390/d12020081⟩. ⟨hal-02529839⟩
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https://hal.umontpellier.fr/hal-02529839/file/Fortunel_et%20al_Diversity_2020_12_2.pdf BibTex
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Heidy Schimann, Jason Vleminckx, Christopher Baraloto, Julien Engel, Gaëlle Jaouen, et al.. Tree communities and soil properties influence fungal community assembly in neotropical forests. Biotropica, Wiley, 2020, 52 (3), pp.444-456. ⟨10.1111/btp.12747⟩. ⟨hal-02502383⟩
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Sylvain Schmitt, Isabelle Maréchaux, Jérôme Chave, Fabian Jörg Fischer, Camille Piponiot, et al.. Functional diversity improves tropical forest resilience: Insights from a long‐term virtual experiment. Journal of Ecology, Wiley, 2020, 108 (3), pp.831-841. ⟨10.1111/1365-2745.13320⟩. ⟨hal-02394908⟩
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https://hal.umontpellier.fr/hal-02394908/file/Schmitt_et_al-2019-Journal_of_Ecology_V2.pdf BibTex
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Martin Sullivan, Simon Lewis, Kofi Affum-Baffoe, Carolina Castilho, Flávia Costa, et al.. Long-term thermal sensitivity of Earth’s tropical forests. Science, American Association for the Advancement of Science, 2020, 368 (6493), pp.869-874. ⟨10.1126/science.aaw7578⟩. ⟨hal-02650649⟩
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Hans ter Steege, Paulo Prado, Renato de Lima, Edwin Pos, Diogenes de Andrade, et al.. Biased-corrected richness estimates for the Amazonian tree flora. Scientific Reports, Nature Publishing Group, 2020, 10, pp.10130. ⟨10.1038/s41598-020-66686-3⟩. ⟨hal-02883980⟩
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https://hal.inrae.fr/hal-02883980/file/TerSteege_etal_Scientific_Reports_2020_10.pdf BibTex

2019

Journal articles

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Laure Barrabé, Sébastien Lavergne, Giliane Karnadi-Abdelkader, Bryan Drew, Philippe Birnbaum, et al.. Changing Ecological Opportunities Facilitated the Explosive Diversification of New Caledonian Oxera (Lamiaceae). Systematic Biology, Oxford University Press (OUP), 2019, 68 (3), pp.460 - 481. ⟨10.1093/sysbio/syy070⟩. ⟨hal-02361586⟩
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https://hal.umontpellier.fr/hal-02361586/file/Barrabe_etal_Systematic_Biology_2019_68_3.pdf BibTex
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Grégoire Blanchard, François Munoz, Thomas Ibanez, Vanessa Hequet, Hervé Vandrot, et al.. Regional rainfall and local topography jointly drive tree community assembly in lowland tropical forests of New Caledonia. Journal of Vegetation Science, Wiley, 2019, 30 (5), pp.845-856. ⟨10.1111/jvs.12781⟩. ⟨hal-02316093⟩
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Ruksan Bose, Brahmasamudra Ranganna Ramesh, Raphaël Pélissier, François Munoz. Phylogenetic diversity in the Western Ghats biodiversity hotspot reflects environmental filtering and past niche diversification of trees. Journal of Biogeography, Wiley, 2019, 46 (1), pp.145-157. ⟨10.1111/jbi.13464⟩. ⟨hal-02052602⟩
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Helge Bruelheide, Jurgen Dengler, Borja Jiménez‐alfaro, Oliver Purschke, Stephan Hennekens, et al.. sPlot – A new tool for global vegetation analyses. Journal of Vegetation Science, Wiley, 2019, 30 (2), pp.161-186. ⟨10.1111/jvs.12710⟩. ⟨hal-02132381⟩
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Henri Caron, Jean‐françois Molino, Daniel Sabatier, Patrick Léger, Philippe Chaumeil, et al.. Chloroplast DNA variation in a hyperdiverse tropical tree community. Ecology and Evolution, Wiley Open Access, 2019, 9 (8), pp.4897-4905. ⟨10.1002/ece3.5096⟩. ⟨hal-02108230⟩
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https://hal.umontpellier.fr/hal-02108230/file/Caron_et_al-2019-Ecology_and_Evolution_2019_9_8.pdf BibTex
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Thomas Denis, Cécile Richard-Hansen, Olivier Brunaux, Stéphane Guitet, Bruno Hérault. Birds of a feather flock together: Functionally similar vertebrates positively co-occur in Guianan forests. Ecosphere, Ecological Society of America, 2019, 10 (3), pp.e02566. ⟨10.1002/ecs2.2566⟩. ⟨hal-02133883⟩
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L. Duncanson, J. Armston, M. Disney, V. Avitabile, Nicolas Barbier, et al.. The Importance of Consistent Global Forest Aboveground Biomass Product Validation. Surveys in Geophysics, Springer Verlag (Germany), 2019, 40 (4), pp.979-999. ⟨10.1007/s10712-019-09538-8⟩. ⟨hal-02403066⟩
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https://hal.archives-ouvertes.fr/hal-02403066/file/Duncanson_etal_Surveys_Geophysics_2019_40-4.pdf BibTex
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Brian Enquist, Xiao Feng, Brad Boyle, Brian Maitner, Erica Newman, et al.. The commonness of rarity: Global and future distribution of rarity across land plants. Science Advances , American Association for the Advancement of Science (AAAS), 2019, 5 (11), pp.eaaz0414. ⟨10.1126/sciadv.aaz0414⟩. ⟨hal-02411666⟩
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Adriane Esquivel-Muelbert, Timothy Baker, Kyle Dexter, Simon Lewis, Roel Brienen, et al.. Compositional response of Amazon forests to climate change. Global Change Biology, Wiley, 2019, 25 (1), pp.39-56. ⟨10.1111/gcb.14413⟩. ⟨hal-02052715⟩
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https://hal.umontpellier.fr/hal-02052715/file/Esquivel-Muelbert_et_al-2019-Global_Change_Biology.pdf BibTex
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Fabian Jörg Fischer, Isabelle Maréchaux, Jérôme Chave. Improving plant allometry by fusing forest models and remote sensing. New Phytologist, Wiley, 2019, 223 (3), pp.1159-1165. ⟨10.1111/nph.15810⟩. ⟨hal-02191073⟩
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Claire Fortunel, Ian Mcfadden, Renato Valencia, Nathan Kraft. Neither species geographic range size, climatic envelope, nor intraspecific leaf trait variability capture habitat specialization in a hyperdiverse Amazonian forest. Biotropica, Wiley, 2019, 51 (3), pp.304-310. ⟨10.1111/btp.12643⟩. ⟨hal-02141808⟩
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Charlotte Grossiord, Bradley Christoffersen, Aura Alonso-Rodríguez, Kristina Anderson-Teixeira, Heidi Asbjornsen, et al.. Precipitation mediates sap flux sensitivity to evaporative demand in the neotropics. Oecologia, Springer Verlag, 2019, 191 (3), pp.519-530. ⟨10.1007/s00442-019-04513-x⟩. ⟨hal-02346487⟩
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Thomas Ibanez, Gunnar Keppel, Christophe E. Menkès, Thomas Gillespie, Matthieu Lengaigne, et al.. Globally consistent impact of tropical cyclones on the structure of tropical and subtropical forests. Journal of Ecology, Wiley, 2019, 107 (1), pp.279-292. ⟨10.1111/1365-2745.13039⟩. ⟨hal-02055558⟩
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Thomas Ibanez, Philippe Birnbaum, Gildas Gâteblé, Vanessa Hequet, Sandrine Isnard, et al.. Twenty years after Jaffré et al. (1998), is the system of protected areas now adequate in New Caledonia?. Biodiversity and Conservation, Springer Verlag, 2019, 28 (1), pp.245-254. ⟨10.1007/s10531-018-1659-y⟩. ⟨hal-02055527⟩
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Anthony Laybros, Daniel Schläpfer, Jean-Baptiste Feret, Laurent Descroix, Caroline Bedeau, et al.. Across Date Species Detection Using Airborne Imaging Spectroscopy. Remote Sensing, MDPI, 2019, 11 (7), pp.789. ⟨10.3390/rs11070789⟩. ⟨hal-02123847⟩
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https://hal.umontpellier.fr/hal-02123847/file/Laybros_etal_Remote_Sens_2019_11_7.pdf BibTex
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Zinger Lucie, Pierre Taberlet, Heidy Schimann, Aurélie Bonin, Frédéric Boyer, et al.. Body size determines soil community assembly in a tropical forest. Molecular Ecology, Wiley, 2019, 28 (3), pp.528-543. ⟨10.1111/mec.14919⟩. ⟨hal-02079020⟩
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Jean-François Molino, M. Mestre, G. Odonne. L'Amazonie, jardin des Amérindiens. La Recherche. Les Essentiels, 2019, 32 (No spécial "La Biodiversité en péril"), p. 18-22. ⟨hal-02405714⟩
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Guillaume Odonne, Martijn Bel, Maxime Burst, Olivier Brunaux, Milena Bruno, et al.. Long‐term influence of early human occupations on current forests of the Guiana Shield. Ecology, Ecological Society of America, 2019, 100 (10), pp.e02806. ⟨10.1002/ecy.2806⟩. ⟨hal-02276947⟩
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Edwin Pos, Juan Ernesto Guevara, Jean-François Molino, Daniel Sabatier, Olaf S. Bánki, et al.. Scaling issues of neutral theory reveal violations of ecological equivalence for dominant Amazonian tree species. Ecology Letters, Wiley, 2019, 22 (7), pp.1072-1082. ⟨10.1111/ele.13264⟩. ⟨hal-02164675⟩
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https://hal.umontpellier.fr/hal-02164675/file/Pos_et_al-2019-Ecology_Letters_22_7.pdf BibTex
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Robin Pouteau, Francois Munoz, Philippe Birnbaum. Disentangling the processes driving tree community assembly in a tropical biodiversity hotspot (New Caledonia). Journal of Biogeography, Wiley, 2019, 46 (4), pp.796-806. ⟨10.1111/jbi.13535⟩. ⟨hal-02138278⟩
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T. Stévart, Gilles Dauby, P Lowry Ii, A. Blach-Overgaard, Vincent Droissart, et al.. A third of the tropical African flora is potentially threatened with extinction. Science Advances , American Association for the Advancement of Science (AAAS), 2019, 5 (11), pp.eaax9444. ⟨10.1126/sciadv.aax9444⟩. ⟨hal-02373952⟩
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https://hal.umontpellier.fr/hal-02373952/file/Dauby_etal_Science_Advances_2019_5_11.pdf BibTex
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Hans ter Steege, Terry Henkel, Nora Helal, Beatriz Marimon, Ben Hur Marimon-Junior, et al.. Rarity of monodominance in hyperdiverse Amazonian forests. Scientific Reports, Nature Publishing Group, 2019, 9 (1), ⟨10.1038/s41598-019-50323-9⟩. ⟨hal-02297448⟩
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https://hal.umontpellier.fr/hal-02297448/file/Sabatier_Molino_Engel_etal_Scientific_Report_2019_9_1.pdf BibTex
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Jason Vleminckx, Heidy Schimann, Thibaud Decaëns, Mélanie Fichaux, Vincent Vedel, et al.. Coordinated community structure among trees, fungi and invertebrate groups in Amazonian rainforests. Scientific Reports, Nature Publishing Group, 2019, 9 (1), ⟨10.1038/s41598-019-47595-6⟩. ⟨hal-02272181⟩
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Jenny Zambrano, Carol Garzon-Lopez, Lauren Yeager, Claire Fortunel, Norbert Cordeiro, et al.. The effects of habitat loss and fragmentation on plant functional traits and functional diversity: what do we know so far?. Oecologia, Springer Verlag, 2019, 191 (3), pp.505-518. ⟨10.1007/s00442-019-04505-x⟩. ⟨hal-02346570⟩
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